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Hi, I'm Diane and I'm happy to help you today.
It's showing up in the list of files on the OneDrive Home page?
Can you find it under My Files? If so, you can delete it from there.
That said, there are other reports that the links for deleted OneNote notebooks are still showing on the Home tab but nowhere else. I'll make the product team aware of this bug. (I have one of the orphaned links on my list too.)
Let me know how it goes, I'm here to help you further if needed.
-- Diane