Hello Silas Wharton,
Based on your description, this appears more likely to be an Office client integration difference between Word and Excel rather than a SharePoint library configuration issue, since both document types are stored in the same SharePoint 2019 library but exhibit different check-in behavior.
To help isolate the cause, I'd recommend the following troubleshooting steps:
1. Verify the document status in SharePoint after Excel checks in the file
After performing the check-in from Excel:
- Refresh the SharePoint library.
- Confirm whether the workbook is still shown as checked out.
- Compare the result with a Word document in the same library.
If SharePoint shows the workbook as successfully checked in and no longer checked out, Excel may simply be ending the checkout session as part of its normal workflow. If SharePoint still shows the file as checked out while Excel loses the SharePoint connection indicator, that would point to a client-side issue.
2. Test with a newly created workbook
To determine whether the issue is workbook-specific:
- Create a brand-new XLSX file.
- Upload it to the same library.
- Check it out, edit it, and perform multiple check-in/check-out cycles.
3. Test another workstation
If possible, test:
- Same workbook
- Same SharePoint library
- Different workstation/user
This will help determine whether the issue follows the workbook, the user profile, or the local Office installation.
4. Clear the Office document cache
If your Office version includes the Office document cache functionality, clear the cache using Microsoft's supported method and then retest. Corrupted cache entries can sometimes affect SharePoint document synchronization behavior.
Important note regarding supportability
It's also worth noting that SharePoint Server 2019 reached end of extended support on July 15, 2026. Microsoft no longer provides security updates, bug fixes, or technical support for this product. Organizations are encouraged to plan a migration to either SharePoint Server Subscription Edition (for on-premises deployments) or SharePoint Online.
I hope this information helps.Kind Regards.